Herman Phaff isolated, purified, and thoroughly characterized thousands of strains over the years. Many did not match known species at the time, and were designated simply by genus, such as “Candida sp.” or “Pichia sp.” Until his death at the age of 88, he continued to spend time in his laboratory, characterizing these strains gathered over the years, and publishing one or two new species descriptions per year.
Ribosomal sequencing of the D1/D2 region of the large (26S) ribosomal subunit of hundreds of these strains has revealed upwards of 100 unpublished species in the Phaff collection. Two obstacles currently delay the publication of these species: additional isolates, and further characterization. We would like to offer to share ribosomal sequences of these potentially novel species to researchers who have additional isolates and wish to collaborate on publication of these new species.
All sequences have been compared to those in public databases using the NCBI Nucleotide-Nucleotide blast search [http://www.ncbi.nlm.nih.gov]. The sequences selected for listing on this web site differ by six or more nucleotides (1% divergence) from other sequence accessions. Many additional sequences have been obtained that differ by one to five nucleotides, but are not considered novel species at this time. Contact the collection curator for information on these similar strains.
The potentially new species have been divided into two groups, ascomycetes and basidiomycetes. By clicking on the links below, you will download a table of strains of potentially new species, sorted by the most similar published species. For example, strain UCD 74-1030 is listed alphabetically under “P” because it differs from Pichia pastoris by six substitutions.
Ascomycetous novel species
Basidiomycetous novel species
Potential new species in the Phaff collection
Based on over 1% divergence in the D1D2 region of the large (26S) ribosomal subunit
|
Top hit in BLAST search |
Strain ID number |
Source |
Results of BLAST search |
|
ASCOMYCETES |
|||
|
Ambrosiozyma philentoma |
73-686 |
Island of Hawaii. Isolated from full crop of Drosophila setosifrons, male. |
10 nt different from Ambrosiozyma philentoma |
|
andida tanzawaensis. |
68-639 |
Near Portage Glacier near Anchorage. Isolated from exudate of Alnus sinuata (sitka alder). |
23 nt different from Candida tanzawaensis. 323, 360 and 370 have same D1D2 sequence. |
|
Candida amapae NRRL Y-17845 |
68-1010.3 |
Highway 26, Oregon isolated from phloem of A. concolor, frass and tunnels" |
27 nt different from Candida amapae NRRL Y-17845 |
|
Candida batistae |
61-130 |
Peach orchards, near Winters, CA 2/14/61, isolated from Drosophila pseudoobscura |
24 nt different from Candida batistae |
|
Candida batistae. |
62-138 |
Canada Isolated by J.F.T. Spencer from Astragalus or Vicia sp. flowers in Canada. |
24 nt different from Candida batistae. Same as 157 = 62-205. Different from 119 |
|
Candida batistae |
62-205 |
Saskatoon, Canada. Isolated by J.F.T. Spencer from an unidentified flower near Saskatoon, Canada. |
23 nt plus two 1-nt insertions from Candida batistae. Identical to 117. Different from 119 |
|
Candida bituminiphila |
76-10 |
Isolated from Drosophila carbonaria breeding in mesquite flux by W. Starmer (Starmer#75-159.4) |
21 nt plus large insertion different from Candida bituminiphila (same as 406) |
|
Candida bituminiphila |
76-5 |
Isolated from flux of Prosopis juliflora (mesquite tree) by W.T. Starmer (Starmer#75-140.6) |
21 nt plus large insertion different from Candida bituminiphila (same as 400, 409) |
|
Candida bituminiphila |
76-6 |
isolated from flux of Prosopis juliflora (mesquite tree) by W.T. Starmer (Starmer#75-141.7) |
21 nt plus large insertion different from Candida bituminiphila (same as 400, 406) |
|
Candida bituminiphila |
76-7 |
isolated from flux of Prosopis juliflora (mesquite tree) by W.T. Starmer (Starmer#75-142.6) |
21 nt plus large insertion different from Candida bituminiphila (same as 400, 406, 409) |
|
Candida bituminiphila |
76-8 |
isolated from flux of Prosopis juliflora (mesquite tree) by W.T. Starmer (Starmer#75-143.6) |
21 nt plus large insertion different from Candida bituminiphila (same as 400, 406, 409, 410) |
|
Candida bituminiphila |
76-9 |
isolated from Drosophila carbonaria breeding in mesquite flux by W. Starmer (Starmer#75-156.4) |
21 nt plus large insertion different from Candida bituminiphila (same as 400, 406, 409, 410, 412) |
|
Candida caseinolytica |
83-414.3 |
Ironwood Park in Tucson Mnts, AZ Rotting cladode of Opuntia phaeacantha |
31 nt different from Candida caseinolytica |
|
Candida caseinolytica |
85-807.5 |
Tucson Opuntia phaecantha |
43 nt different from Candida caseinolytica |
|
Candida davisiana |
05-690 |
Olive fly, Winters CA |
17 nt different from Candida davisiana |
|
Candida cf. glabrata UWO 98-110.4 |
64-1000 |
Microbiology class isolate from cottonwood flux near UCD picnic ground. |
25 nt different from Candida cf. glabrata UWO 98-110.4 |
|
Candida cylindraceae |
73-644.1.2 |
|
7 nt different from Candida cylindraceae |
|
Candida freyschussii |
59-187 |
Obtained from USDA lab in Berkeley "Warm Springs, Indian Reservation, Oregon/59" Isolated from Dendroctonus brevicomis in Pinus ponderosa |
40 nt substitutions/deletions from Candida freyschussii |
|
Candida lactis-condensi. |
62-303 |
Saskatoon, Canada "Isolated by J.F.T. Spencer from Aster sp. in Saskatoon, Canada." |
24 nt plus two large insertions different from Candida lactis-condensi. Same as 058, 336, 337, 338 |
|
Candida lactis-condensi. |
62-304 |
Saskatoon, Canada "Isolated by J.F.T. Spencer from Aster sp. in Saskatoon, Canada." |
17 nt different plus two large insertions from Candida lactis-condensi. 058, 336, 337, 338 same. |
|
Candida lactis-condensi. |
62-305 |
Saskatoon, Canada "Isolated by J.F.T. Spencer from Aster sp. in Saskatoon, Canada." |
24 nt plus two large insertions different from Candida lactis-condensi. Same as 058, 336, 337, 338 |
|
Candida lactis-condensi. |
62-306 |
Saskatoon, Canada "Isolated by J.F.T. Spencer from Aster sp. in Saskatoon, Canada." |
24 nt plus two large insertions different from Candida lactis-condensi. Same as 058, 336, 337, 338 |
|
Candida litsaeae |
69-1026 |
Isolated from flux of a cotton wood tree. Bact. Class isolate 10/69. |
40 nt different from Candida litsaeae |
|
Candida llanquihuiensis |
67-211 |
at Bijo-Daira, Toyama, Japan, altitude 1200m, 5/67." "From exudate of Fagus crenata |
22 nt different from Candida llanquihuiensis |
|
Candida membranifaciens |
80-98 |
M. C. Pignal, Biol. Vegetale, Leures, Bat 405, Lyon I 43, BD iiNOV/9D, 69622, Villerubanne Cedex, France France |
18 nt different from Candida membranifaciens |
|
Candida montana |
54-11.355 |
Knapp, student of Herman Phaff "Yosemite area, Mather" California "Isolated from exudate of black oak (Quercus kelloggii), +/- 5000 ft." |
54 nt different from Candida montana |
|
Candida montana |
72-271 |
Hawaii |
30 nt different from Candida montana |
|
Candida montana |
73-591.2 |
Kilauea Forest. Island of Hawaii. Isolated from Cheirodendron bark with larvae. |
33 nt different from Candida montana |
|
Candida montana |
73-593.2 |
Kilauea Forest. Island of Hawaii. Isolated from Cheirodendron bark with larvae. |
32 nt different from Candida montana |
|
Candida oleophila |
92-81 |
Hseto Park. Taiwan Moss on bark of Zelkova serrata |
37 nt plus 2 insertions different from Candida oleophila |
|
Candida ontarioensis |
61-362 |
"UCD Campus, Jan.. 1961" Isolated from slime flux of Ulmus carpinifolia |
25 nt plus large insertions different from Candida ontarioensis |
|
Candida ontarioensis |
61-365 |
"UCD Campus, Jan., 1961" Isolated from slime flux of Ulmus carpinifolia |
13 nt plus large insertion different from Candida ontarioensis |
|
Candida palmioleophila |
76-564 |
Arizona isolated from mushrooms |
24 nt different from Candida palmioleophila |
|
Candida palmioleophila. |
76-589 |
Arizona isolated from mushrooms |
29 nt different from Candida palmioleophila. Compare to 408. |
|
Candida piceae |
67-525 |
Inago, Yamagat, Japan "From exudate of Cornus controversa at Inago, Yamagat, Japan, 5/67." |
7 nt different from Candida piceae. 071, 380 and 382 have same D1D2 sequence. |
|
Candida piceae. |
68-823 |
"At mile 210, Alcan Highway, British Columbia, Canada." Isolated from active flux of Betula sp. |
7 nt different from Candida piceae.. 071, 380 and 382 have same D1D2 sequence. |
|
Candida piceae |
68-921.2 |
"5 miles from Emory Creek, Br. Columbia, Canada" isolated from active flux of Betula sp. |
7 nt different from Candida piceae.. 071, 380 and 382 have same D1D2 sequence. |
|
Candida pseudointermedia |
67-305 |
Mt Kunimi, Japan "From exudate of Betula grossa, Mt. Kunimi, Japan, altitude 1200m." |
24 nt substitutions/insertions plus two large insertions different from Candida pseudointermedia |
|
Candida shehatae var. lignosa |
68-643 |
Phaff "on Swan Lake Rd, Kenai Peninsula Alaska." Isolated from frass of Picea sitchensis (sitka spruce). |
31 nt different from Candida shehatae var. lignosa. Same as 285. |
|
Candida shehatae var. lignosa |
68-768.1 |
Phaff "mile 584 Alcan Highway, British Columbia, Canada." Isolated from dead Picea (spruce) sp. with secodary frass & beetles. |
31 nt different from Candida shehatae var. lignosa. Same as 284. |
|
Candida silvatica |
51-150 |
"Aspen Valley, Yosemite area, California 07/51" Isolated from Drosophila occidentalis |
13 nt different from Candida silvatica |
|
Candida silvatica. |
67-212 |
at Rijo-Daira, Toyama, Japan, altitude 1200m, 5/67." "From exudate of Fagus crenata |
11 nt different plus two large insertions from Candida silvatica. Incomplete sequence data. |
|
Candida sp. NRRL Y-17456 |
83-23 |
Almond hulls (dry) 7 June 1983 |
2 nt plus two large insertions different from Candida sp. NRRL Y-17456 |
|
Candida sp. NRRL Y-17678 |
92-55 |
Hseto Park, Taiwan Flowers of Brugmansia suaveoleus |
27 nt plus two large insertions different from Candida sp. NRRL Y-17678. A few nt different from 588. |
|
Candida sp. NRRL Y-17678 |
92-61 |
Hseto Park, Taiwan Rotten bamboo shoot of Phyllostachys pubescens |
24 nt plus two large insertions different from Candida sp. NRRL Y-17678 |
|
Candida sp. NRRL YB-2076 |
67-201 |
Hiroshima, Japan "Isolated from exudate of Fagus crenata, Hiroshima (Kario-yama) 1200 meter, Japan, 4/67." |
20 nt different from Candida sp. NRRL YB-2076 |
|
Candida sp. UWO 95-697.4 |
67-288 |
Mt Kunimi, Japan "From exudate of Betula grossa, Mt. Kunimi, Japan. 4/67." |
17 nt different from Candida sp. UWO 95-697.4 |
|
Candida tanzawaensis |
68-778.1 |
"Liard Hot spring. mile 496 Alcan Highway, British Columbia, Canada." Isolated from “Sun Dew” insect eating plant. |
23 nt different from Candida tanzawaensis. 323, 360 and 370 have same D1D2 sequence. |
|
Candida tanzawaensis U44811.1. |
60-376 |
"Peach Orchard near Winters, 11/60" Isolated from Drosophila pseudoobscura |
23 nt different from Candida tanzawaensis U44811.1. 323, 360 and 370 have same D1D2 sequence. |
|
Candida trypodendroni |
83-723 |
"Great Inagua Island, Bahamas, West Indies" Opuntia moniliformis |
12 nt different from Candida trypodendroni; same as 425 |
|
Candida trypodendroni NRRL Y-6488 |
83-722 |
"Great Inagua Island, Bahamas, West Indies" Opuntia moniliformis |
12 nt different from Candida trypodendroni NRRL Y-6488 = CBS 8505. Same as 426 |
|
Candida wyomingensis |
68-699.1 |
"60 mi S. of Tok on Highway 1, Alaska." Isolated from exudate of Salix sp. |
3 nt plus deletions from Candida wyomingensis |
|
Cryptococcus cylindricus |
73-630.2.2 |
Island of Hawaii. Isolated from lower surface of Cheirodendron brown leaf. |
17 nt different from Cryptococcus cylindricus |
|
Dipodascus australiensis |
91-469.4 |
"Northern Argentina south of Chucalesne, south of Huoma huaca" Isolated from Trichocereus pasacanna |
10 nt different plus deletions from Dipodascus australiensis |
|
Dipodascus ingens |
91-476.3 |
Along the road east from Tucuman to Termas Isolated from Opuntia quimilo |
6 nt different plus insertions from Dipodascus ingens |
|
Dipodascus starmeri |
81-155 |
"Piritu, Venezuela" rot of Opuntia elatior |
9 nt different from Dipodascus starmeri |
|
Dipodascus starmeri |
81-485.5 |
"City of Tucson, AZ" Opuntia ficus-indica |
10 nt different from Dipodascus starmeri |
|
Dipodascus starmeri |
82-634.4 |
"Prickly Pear Island, near Virgin Gorda, West Indies" Cephalocereus royenii |
7 nt different from Dipodascus starmeri |
|
Endomyces decipiens |
67-497 |
Yatani, Yamagata, Japan "From exudate of Betula maximowicziana at Yatani, Yamagata, Japan, 5/67." |
63 nt different from Endomyces decipiens |
|
Galactomyces sp. NRL Y-6418 |
81-298 |
ATCC |
15 nt different from Galactomyces sp. NRL Y-6418 |
|
Galactomyces sp. NRRL Y-6418 |
63-3 |
"Received from Dr. Vagn Jensen, Copenhagen, Denmark, 1963." |
16 nt different from Galactomyces sp. NRRL Y-6418 |
|
Galactomyces sp. NRRL Y-6418 |
69-17 |
"Obtained from CBS 3/69 under #2847. Origin: Mrs. G.R. Gosh, Orissa, India." Ex “torani” |
13 nt different from Galactomyces sp. NRRL Y-6418 |
|
Geotrichum fragrans. |
68-809.2 |
"At mile 298, Alcan Highway, British Columbia, Canada." Isolated from active flux of Populus trichocarpa. |
25 nt different from Geotrichum fragrans. 371 and 375 have same D1D2 sequence. |
|
Geotrichum fragrans |
68-872 |
"155 mi north of Prince George. Br. Columbia, Canada." Isolated from active flux of Populus trichocarpa. |
25 nt different from Geotrichum fragrans. 371 and 375 have same D1D2 sequence. |
|
Geotrichum klebahnii |
73-598.1 |
Island of Hawaii |
12 nt different from Geotrichum klebahnii |
|
ichia meyerae |
61-254 |
"Cedar Pass, N.E. California, August 1961" Isolated from Drosophila pseudoobscura |
30 nt different from Pichia meyerae. 052, 053, 054, 379 and 383 have same D1D2 sequence. |
|
ichia meyerae |
61-260 |
"Cedar Pass, N.E. California, August, 1961" Isolated from Drosophila pseudoobscura |
32 nt different from Pichia meyerae. 052, 053, 054, 379 and 383 have same D1D2 sequence. |
|
ichia meyerae |
61-266 |
"Cedar Pass, N.E. California, August, 1961" Isolated from Drosophila pseudoobscura |
23 nt different plus several insertions from Pichia meyerae. 052, 053, 054, 379 and 383 have same D1D2 sequence. |
|
Issatchenkia scutulata var. exigua. |
72-193 |
Thailand "Isolated from final vibrating screen in Thai Prapinpon Oriental Food Factory, Thailand, 3/72" |
14 nt different from Issatchenkia scutulata var. exigua. Same as 280 and 281 |
|
Issatchenkia scutulata var. exigua. |
72-199 |
Thailand "Isolated from final vibrating screen in Thai Prapinpon Oriental Food Factory, Thailand, 3/72" |
14 nt different from Issatchenkia scutulata var. exigua. Same as 279 and 280. |
|
Metschnikowia koreensis |
03-581 |
Nicaragua, Departamento Jinotega, NW of town of Jinotega, Reserva El Juaguar, GPS at cabin 13 14 17, 86 03 10, elevation 4340 ft Rubiacea flowers, UCD Herbarium ID # 1427 |
20 nt plus two large insertions different from Metschnikowia koreensis |
|
Metschnikowia koreensis |
60-278 |
Davis, California., October, 1960. Isolated from sugary exudate on elm leaf |
6 nt plus two large insertions different from Metschnikowia koreensis |
|
Metschnikowia koreensis |
92-75 |
Hweihsi Forest mainly flowers. Tree exudate of Aleurites montana |
20 nt plus two large insertions different from Metschnikowia koreensis |
|
Metschnikowia koreensis KCTC 7998 |
73-630.2.1 |
Island of Hawaii. Isolated from lower side of brown leaf of Cheirodendron. |
19 nt different plus two large insertions from Metschnikowia koreensis KCTC 7998 |
|
Metschnikowia koreensis |
03-581 |
Rubiacea flowers, Nicaragua |
20 nt plus two large insertions different from Metschnikowia koreensis |
|
Metschnikowia sp. KCTC 7828, [now called M, koreensis 7-03] |
73-680.1 |
Island of Hawaii. Isolated from full clear crop of Drosophila sordidapex, male." |
22 nt different from Metschnikowia koreensis |
|
Metschnikowia sp. NRRL Y-7275. |
80-256.1 |
Chrysopa carnea (lacewing) |
43 nt different from Metschnikowia sp. NRRL Y-7275. 6 nt different from 172 |
|
Metschnikowia sp. NRRL Y-7275. |
80-3 |
Yeast symbiote from crop of wild-collected adult females of Nodita sp. (Neuroptera: Chrysopidae) |
34 nt different from Metschnikowia sp. NRRL Y-7275. 6 nt different from 224 |
|
Metschnikowia sp. NRRL Y-7275 |
80-4 |
Yeast symbiote from crop of wild-collected adult females of Nodita sp. (Neuroptera: Chrysopidae) |
27 nt different from Metschnikowia sp. NRRL Y-7275 |
|
Metschnikowia sp. NRRL Y-7275 |
80-6 |
"Isolates #1, 2, 3, 4 from Entomology Dept., Univ. of Calif. Berkeley Calif." Yeast symbiote from crop of wild-collected adult females of Nodita sp. (Neuroptera: Chrysopidae) |
27 nt different from Metschnikowia sp. NRRL Y-7275 |
|
Metschnikowia zobellii; |
92-76 |
Hweihsi Forest, Taiwan Tree exudate of Aleurites montana |
3 nt plus two large insertions different from Metschnikowia zobellii; same as 461 and 459 |
|
Pichia barkeri |
04-814 |
Olive fly, Winters, CA |
7 nt different from Pichia barkeri |
|
Pichia cactophila |
81-111 |
Prudencio, Venezuela, rot of Stenocereus griseus |
8 nt different and 4 nt insertions from Pichia cactophila. Same as 096 |
|
Pichia cactophila. |
81-111.1 |
Prudencio, Venezuela, rot of Stenocereus griseus |
8 nt different and 4 nt insertions from Pichia cactophila. Same as 096 |
|
Pichia cactophila. |
81-111.2 |
Prudencio, Venezuela, rot of Stenocereus griseus |
8 nt different and 4 nt insertions from Pichia cactophila. Same as 096 |
|
Pichia cactophila |
82-472.1 |
Gonnaieve II, Haiti Cephalocereus |
10 nt different from Pichia cactophila |
|
Pichia cactophila |
82-608.1 |
Beef island-Tortola, BWI, Caribbean, rot of Cephalocereus royenii |
11 nt different from Pichia cactophila |
|
Pichia cactophila. |
83-1117.1 |
Little Cayman Island, Caribbean Opuntia fruit |
8 nt different plus 4 nt deleted from Pichia cactophila. Same as 190 |
|
Pichia capsulata |
60-130 |
Caribou Lake, Lassen National Forest, 1960, California Isolated from a larva of Pityophthorus in Abies magnifica |
11 nt different from Pichia capsulata |
|
Pichia capsulata |
60-288 |
do Carmo-Sousa, Shore of Caribou Lake, Lassen Co., May, 1960, California Isolated from frass of Abies magnifica |
11 nt different from Pichia capsulata |
|
Pichia capsulata |
60-289 |
do Carmo-Sousa, Shore of Caribou Lake, Lassen Co., May, 1960" California Isolated from frass of Abies magnifica |
11 nt different from Pichia capsulata |
|
Pichia capsulata |
60-290 |
do Carmo-Sousa, Shore of Caribou Lake, Lassen Co., May, 1960 California "Isolated from frass of Abies magnifica, Pityophtorus infestation" |
11 nt different from Pichia capsulata |
|
Pichia capsulata |
68-936.1 |
Parksville Vancouver Island, Canada, isolated from frass in a recently attacked specimen of Pseudotsuga taxifolia |
13 nt different from Pichia capsulata |
|
Pichia fabianii |
68-948 |
5 miles South of Nanaimo, Vancouver Island, Canada, isolated from dry flux of Alnus sp. |
8 nt different from Pichia fabianii |
|
Pichia fabianii |
76-701.2 |
Patrick point, Northern California coast area, isolated from mushrooms |
8 nt different from Pichia fabianii |
|
Pichia hawaiiensis |
73-641.2 |
Island of Hawaii Isolated from rotting Sapindus bark with many larvae. |
13 nt different from Pichia hawaiiensis |
|
Pichia hawaiiensis |
73-747.2 |
West Maui, Hawaii." Isolated from Agroxiphium bark in Eke crater. |
16nt plus large insertion different from Pichia hawaiiensis |
|
Pichia heedii |
04-125 |
Apple with Drosohila melanogasterlarvae, Stamps laboratory, UCD |
7 nt different from Pichia heedii |
|
Pichia kluyveri var. cephalocereum |
76-202.2 |
Baja California Sur, Mexico" isolated from rotting arm of organ pipe cactus (Stenocereus thurberi) |
7 nt different from Pichia kluyveri var. cephalocereum |
|
Pichia lachancei |
72-272 |
Hawaii |
8 nt different from Pichia lachancei |
|
Pichia mexicana |
81-120 |
Prudencio, Venezuela, rot of Stenocereus griseus |
13 nt different from Pichia mexicana |
|
Pichia mexicana |
81-524.3 |
City of Tucson, AZ, Opuntia ficus-indica |
13 nt different from Pichia mexicana |
|
Pichia mexicana |
81-526.2 |
City of Tucson, AZ, Opuntia ficus-indica |
13 nt different from Pichia mexicana |
|
Pichia mexicana |
82-427 |
Site II, Road to Fond Parisienne, Haiti, Opuntia stricta v. dilennii |
13 nt different from Pichia mexicana |
|
Pichia mexicana |
82-439 |
Site III, Fond Parisienne, Haiti, Opuntia moniliformis |
13 nt different from Pichia mexicana |
|
Pichia mexicana |
83-720.2 |
Great Inagua Island, Bahamas, West Indies, Opuntia moniliformis |
13 nt different from Pichia mexicana |
|
Pichia mexicana |
83-721.1 |
Great Inagua Island, Bahamas, West Indies, Opuntia moniliformis |
13 nt different from Pichia mexicana |
|
Pichia mexicana |
83-867.4 |
"Navassa Island, Caribbean Sea" rot of Opuntia stricta |
13 nt different from Pichia mexicana |
|
Pichia mexicana |
83-985.3 |
Discovery Bay, Jamaica Rotting Opuntia stricta pads |
13 nt different from Pichia mexicana |
|
Pichia meyerae |
68-915 |
Emory Creek, Br. Columbia, Canada, isolated from insect frass and flux of Salix sp. |
38 nt different from Pichia meyerae.. 052, 053, 054, 379 and 383 have same D1D2 sequence. |
|
Pichia meyerae |
68-945.2 |
5 miles South of Nanaimo, Vancouver Island, Canada, isolated from frass from bore holes in Salix sp. |
38 nt different from Pichia meyerae.. 052, 053, 054, 379 and 383 have same D1D2 sequence. |
|
Pichia minuta |
73-506.2 |
Rotting cheirodendron branch with drosophila larvae at 3900 ft elevation, Island of Hawaii. |
18 nt different from Pichia minuta |
|
Pichia minuta |
73-507.2 |
Rotting cheirodendron branch with drosophila larvae at 3900 ft elevation. Island of Hawaii. |
18 nt different from Pichia minuta |
|
Pichia opuntiae |
76-99.1 |
Hawaii, Slime flux of Wickstromia sp. |
43 nt different from Pichia opuntiae |
|
Pichia opuntiae |
78-64 |
Culture from Tom Starmer 7/31/78 = S-78-58, isolated by Eladio Izquierdo, student of Antonio Fontdevila Near Almeria, Spain Rotting pad of Opuntia ficus-indica |
12 nt different from Pichia opuntiae. NOTE: Evidence of “migrating” nucleotides: 8 of 12 nt show residual P. opuntiae peak. |
|
Pichia opuntiae |
78-65 |
from Tom Starmer 7/31/78 = S-78-114 |
9 nt different from Pichia opuntiae; two nt with residual P. opuntiae sequence |
|
Pichia pastoris |
74-1030 |
Hackberry flux |
6 nt different plus 2 bp deletion from Pichia pastoris |
|
Pichia pilisensis |
68-650.2 |
On Swan Lake Rd, Kenai Peninsula Alaska. Isolated from exudate of Betula papyrifera. |
7 nt different from Pichia pilisensis |
|
Pichia populi |
68-617.3 |
40 mi north of Haines, Br. Columbia, Canada. Isolated from frass of a Picea sp. |
New/similar? 7 nt different from Pichia populi |
|
Pichia populi |
91-459.1 |
Northern Argentina near Pulmamarca, Prov. of Tucuman, Isolated from Trichocereus pasacanna |
13 nt plus deletions and insertions different from Pichia populi |
|
Pichia populi |
91-469.2 |
Northern Argentina south of Chucalesne, south of Huoma huaca, Isolated from Trichocereus pasacanna |
15 nt plus two insertions different from Pichia populi |
|
Pichia sp. NRRL Y-11513 |
68-613.2 |
Prince Rupert area of Br. Columbia, Canada. Isolated from exudate of Populus trichocarpa. |
8 nt different from Pichia sp. NRRL Y-11513 |
|
Pichia sp. NRRL Y-11513 |
68-658.2 |
On road to Portage glacier, Alaska. Isolated from exudate of Populus trichocarpa. |
8 nt different from Pichia sp. NRRL Y-11513 |
|
Pichia sp. NRRL Y-7556 |
67-1008 |
Davis, California. Class isolate from oak flux, UCD quad. |
7 nt different from Pichia sp. NRRL Y-7556 |
|
Pichia sp. NRRL Y-7556 |
71-1036 |
Davis, CA California Quercus suber |
7 nt different from Pichia sp. NRRL Y-7556 |
|
Pichia sp. UWO 99-305.1. |
76-763.5 |
On the island of Hawaii, isolated from Sapinda (soap berry) |
14 nt different from Pichia sp. UWO 99-305.1. 9 nt different from 089. |
|
Pichia sp. UWO 99-305.1. 9 nt different from 178. |
73-706 |
Island of Hawaii, Hawaii. Isolated from larvae on Clermontia. |
10 nt different from Pichia sp. UWO 99-305.1. 9 nt different from 178. |
|
Pichia sp. UWO(PS) 99-305.1 |
73-593.3 |
Kilauea Forest. Island of Hawaii. Isolated from Cheirodendron bark with larvae. |
9 nt different from Pichia sp. UWO(PS) 99-305.1 |
|
Pichia triangularis. |
76-245.1 |
Near Todos Santos, Baja California Sur, Mexico, isolated from rotting arm of cardon cactus (Pachycereus pringlei) |
26 nt plus large insertion different from Pichia triangularis. Same as 104, 101 |
|
Pichia triangularis; |
91-450.4.1 |
Northern Argentina Isolated from Tr. pasacanna cactus |
23 nt different plus large insertion from Pichia triangularis; same as 401, 104 |
|
Pichia triangularis |
91-472.1 |
Trancas on highway 9, Prov. of Tucuman, Isolated from Opuntia quimilo |
21 nt plus large insertion different from Pichia triangularis. Same as 101, 401 |
|
Sporopachydermia UWO 94-257.2 |
72-270 |
Hawaii |
24 nt different from Sporopachydermia UWO 94-257.2 |
|
ssatchenkia scutulata var. exigua |
72-194 |
Isolated from second fiber separation, Thai Prapinpon Oriental Food Factory, Thailand, 3/72 |
14 nt different from Issatchenkia scutulata var. exigua. Same as 279 and 281. |
|
Starmerella bombicola. |
62-142 |
Saskatoon, Canada. Isolated by J.F.T. Spencer from unknown flower in Saskatoon, Canada. |
21 nt different from Starmerella bombicola. Same as 330, 331, 332, 334, 335 |
|
Starmerella bombicola. |
62-171 |
Fort Smith, North West Territory, Canada Isolated by J.F.T. Spencer from Astragalus sp. or Vicia sp. Fort Smith, North West Territory, Canada." |
21 nt different from Starmerella bombicola. Same as 330, 331, 332, 334, 335 |
|
Starmerella bombicola. |
62-203 |
Saskatoon, Canada Isolated by J.F.T. Spencer from Astragalus sp. or Viccia sp. at Saskatoon, Canada. |
21 nt different from Starmerella bombicola. Same as 330, 331, 332, 334, 335 |
|
Starmerella bombicola |
62-209 |
Saskatoon, Canada Isolated by J.F.T. Spencer from Dogwood near Saskatoon, Canada. |
8 nt different from Starmerella bombicola |
|
Starmerella bombicola |
62-238 |
Saskatoon, Canada Isolated by J.F.T. Spencer from Astragalus sp. or Vicia sp. near Saskatoon, Canada. |
21 nt different from Starmerella bombicola. Same as 330, 331, 332, 334, 335. |
|
Starmerella bombicola |
62-240 |
Saskatoon, Canada Isolated by J.F.T. Spencer from Gaillardia sp. near Saskatoon, Canada. |
21 nt different from Starmerella bombicola. Same as 330, 331, 332, 334, 335 |
|
Starmerella bombicola |
62-312.1 |
Saskatoon, Canada Isolated by J.F.T. Spencer from Astragalus sp. or Vicia sp. near Saskatoon, Canada. |
21 nt different from Starmerella bombicola |
|
Wickerhamiellia cacticola ( |
82-543.1 |
Site YaYa, Dominican Republic, Caribbean Selenocereus flower with Drosophila larvae in flower |
11 nt different from Wickerhamiellia cacticola |
|
Yarrowia lipolytica |
74-55 |
Alberta, Canada |
17 nt different from Yarrowia lipolytica |
|
Zygozyma suomiensis |
60-143 |
Caribou Lake, Lassen National Forest, 1960" California Isolated from insect frass of Pityophthorus in Abies magnifica |
10 nt different from Zygozyma suomiensis |
|
Zygozyma suomiensis NRRL Y-17356 |
60-142 |
Caribou Lake, Lassen National Forest, 1960, California. Isolated from insect frass of Pityophthorus in Abies magnifica |
10 nt different from Zygozyma suomiensis NRRL Y-17356 |
|
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|
BASIDIOMYCETES |
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|
Bensingtonia ingoldii CBS7424 |
73-634.2 |
Island of Hawaii. Isolated from lower surface of Cheirodendron leaf; Drosophila egg present. |
15 nt different from Bensingtonia ingoldii CBS7424 |
|
Bullera dendrophila |
04-854 |
Olive, UC Davis campus |
10 nt different from Bullera dendrophila |
|
Bullera dendrophila |
05-676 |
Olive fly, UC Davis campus |
10 nt different from Bullera dendrophila |
|
Cryptococcus dimennae |
83-422.2 |
South of Desert museum, Tucson Mnts, AZ Rotting cladode of Opuntia phaeacantha |
21 nt different from Cryptococcus dimennae |
|
Cryptococcus fragicola |
04-432 |
Olive, Winters CA |
45 nucleotides different from Cryptococcus fragicola |
|
Cryptococcus humicola |
50-70 |
Keen Camp, San Jacinto Mnts, Southern California, Isolated from wild onion flower |
8 nt different from Cryptococcus humicola |
|
Cryptococcus humicola |
76-711.1 |
Patrick point, Northern California coast area, isolated from mushrooms. |
9 nt different from Cryptococcus humicola |
|
Cryptococcus humicola |
76-737.1 |
Patrick point, Northern California coast area" isolated from mushrooms. |
11 nt different from Cryptocoocuus humicola |
|
Cryptococcus humicola |
76-729.2.1 |
Patrick point, Northern California coast area, isolated from mushrooms. |
9 nt different from Cryptococcus humicola |
|
Cryptococcus humicola |
76-738.1.1 |
Patrick point, Northern California coast area, isolated from mushrooms. |
11 nt different from Cryptococcus humicola |
|
Cryptococcus humicola strain CBS 8371 |
76-738.1.2 |
Patrick point, Northern California coast area, isolated from mushrooms. |
11 nt different from Cryptococcus humicola strain CBS 8371 |
|
Cryptococcus sp. CBS 7890 |
68-688.2 |
Delta Junction, Alaska. Isolated from dry exudate of Salix sp. |
11 nt different from Cryptococcus sp. CBS 7890 |
|
Cryptococcus sp. CBS 8355 |
67-312 |
Mt Kunimi, Japan. From exudate of Symplocos myrtacea on Mt. Kunimi, Japan, altitude 1200m, 4/67." |
57 nt different from Cryptococcus sp. CBS 8355 |
|
Cryptococcus sp. IGC5261 |
54-11.153 |
Aspen Valley, Central Sierra Nevada. Isolated from exudate of red fir ( Abies concolor), +/- 6500 ft. |
17 nt different from Cryptococcus sp. IGC5261 |
|
Cryptococcus sp. KCTC 17078 |
78-89 |
isolated by K. Wells Panama from plant material |
28 nt different from Cryptococcus sp. KCTC 17078 |
|
Cryptococcus victoriae |
05-141 |
Green bean seeds |
8-10 nucleotides different from Cryptocccus victoriae |
|
Cryptococcus wieringae CBS 8353 |
73-577.1 |
Island of Hawaii Fresh Cheirodendron leaves, washed with sterile water, plated on AMA |
50 nt different from Cryptococcus wieringae CBS 8353 |
|
Fibulobasidium inconspicuum |
67-51 |
Received from Dr. J.F.T. Spencer, Saskatoon, Sask. Canada; his #627-65, source unknown. |
12 nt different from Fibulobasidium inconspicuum |
|
Filobasidiella neoformans |
68-873 |
120 mi north of Prince George. Br. Columbia, Canada. 3000 feet alt. Isolated from frass and beetles attacking a Picea sp. |
26 nt different from Filobasidiella neoformans |
|
Filobasidium globisporum |
83-617.3 |
Washing from barrel cactus extrafloral nectary |
25 nt different from Filobasidium globisporum |
|
Hyalopicnis blepharistoma |
83-439.4 |
Continental; Santa Rita Mnts around Tucson, AZ Ex rotting cladode of Opuntia phaeacantha |
27 nt different from Hyalopicnis blepharistoma |
|
Rhodotorula hylophila |
68-957.2.2 |
Deer Park, Olympic National Park, Washington State, isolated from frass of Pinus monticola |
31 nt different from Rhodotorula hylophila |
|
Rhodotorula lignophila CBS 7109 |
61-355 |
UCD Campus, Jan., 1961. Isolated from slime flux of Ulmus carpinifolia |
51 nt different from Rhodotorula lignophila CBS 7109 |
|
Rhodotorula lignophila strain CBS 7109 |
72-354 |
At Prairy Creek State Park, Trinidad, Calif. by W.B. Heed.. California. Isolated from fermenting bay tree leaves with Drosophila larvae present. |
12 nt plus large insertion different from Rhodotorula lignophila strain CBS 7109 |
|
Sporisorium ovarium |
73-707 |
Island of Hawaii, Hawaii. Isolated from larvae on Clermontia. |
7 nt different from Sporisorium ovarium |
|
Tremella encephala |
73-630.1.1 |
Island of Hawaii. Isolated from upper side of brown leaf of Cheirodendron. |
41 nt different from Tremella encephala |
|
Tremella fuciformis (CCJ1531) |
67-243 |
Mt. Aoi, Japan, altitude 250m, 4/67 From exudate of Zelkova serrata |
10 nt different from Tremella fuciformis (CCJ1531) |